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Table 1 A comprehensive table of public and private hepatocellular carcinoma (HCC) datasets

From: The power of deep learning in simplifying feature selection for hepatocellular carcinoma: a review

Dataset Name

Description

Access

Link

LiTS (Liver Tumor Segmentation) Challenge Dataset

A dataset of 131 contrast-enhanced CT scans with annotations for liver and liver tumor segmentation

Public

https://competitions.codalab.org/competitions/17094

TCGA-LIHC (The Cancer Genome Atlas—Liver Hepatocellular Carcinoma)

A comprehensive, multi-omics dataset including genomic, transcriptomic, and clinical data for 377 HCC patients

Public

https://portal.gdc.cancer.gov/projects/TCGA-LIHC

LiRad (Liver Imaging Reporting and Data System) Dataset

A dataset of CT and MRI images with annotations based on the LI-RADS classification system for liver lesions

Public

https://www.isi.uu.nl/Research/Databases/LIRADS/

CPTAC-HCC (Clinical Proteomic Tumor Analysis Consortium—Hepatocellular Carcinoma)

A dataset containing proteomic and clinical data for 159 HCC patients

Public

https://proteomics.cancer.gov/data-portal/project/CPTAC-HCC

DeepLesion

A large-scale dataset of 32,735 lesions from 10,594 CT studies, including a subset of HCC lesions

Public

https://nihcc.app.box.com/v/DeepLesion

HCC-LPC (Hepatocellular Carcinoma—Liver Phenotype Classifier)

A dataset of 110 contrast-enhanced CT scans with annotations for HCC and liver phenotypes

Public

https://wiki.cancerimagingarchive.net/display/Public/HCC-LPC

BCLC-HCC (Barcelona Clinic Liver Cancer—Hepatocellular Carcinoma)

A dataset of clinical, radiological, and pathological data for HCC patients treated at the University of Barcelona

Private (available upon request)

http://www.bclc.cat/

Caris Life Sciences

Precision medicine company offering molecular profiling data for HCC

Private (available upon request)

https://www.carislifesciences.com/

Foundation Medicine

Detailed molecular information on cancer, including HCC, derived from clinical specimens

Private (available upon request)

https://www.foundationmedicine.com/

Tempus

Comprehensive cancer data platform providing molecular and clinical data on HCC

Private (available upon request)

https://www.tempus.com/