BMC Medical Informatics and Decision Making

Table 3 The best-performing combinations of prediction methods and blocks per dataset. Cnv: CNV, mirna: miRNA, mut: DNAseq, met: methylation, rna: mRNA

From: Does combining numerous data types in multi-omics data improve or hinder performance in survival prediction? Insights from a large-scale benchmark study

	ibrier		cindex
dataset	prediction method	blocks	prediction method	blocks
BLCA	lasso	rna, mirna	prioritylasso	rna
BRCA	bf	rna, met	bf	rna, mirna
COAD	bf	met	bf	rna, mut
ESCA	ipflasso	mut	rsf	mirna, mut
HNSC	ipflasso	rna, mirna	rsf	rna
LGG	ipflasso	met, cnv	prioritylasso	rna
LIHC	bf	rna, mirna, met, cnv	lasso	rna, cnv
LUAD	lasso	mirna	ipflasso	mut
LUSC	ipflasso	mirna, met	prioritylasso	rna, mirna
PAAD	prioritylasso	rna	bf	rna
SARC	prioritylasso	met, cnv	rsf	mirna, met, mut
SKCM	lasso	rna, mut, cnv	bf	rna
STAD	rsf	rna, mirna, mut	rsf	mirna
UCEC	bf	rna, cnv	rsf	mirna

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ISSN: 1472-6947

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