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Table 1 Comparison of various existing research in protein sequence analysis

From: Optimizing protein sequence classification: integrating deep learning models with Bayesian optimization for enhanced biological analysis

References

Method used

Dataset

Outcome

Future scope

[15]

Attention-based Neural Network

PDB-14,189

Improved classification accuracy

Investigate attention mechanisms in larger datasets

[16]

RNNs

DNA Data Bank of Japan

Improved Classification

Exploration of hybrid models in proteomics research

[17]

Hybrid CNN-RNN Model

European Nucleotide Archive

Enhanced protein structure prediction

Integration of attention mechanisms in drug design

[18]

Transformer Networks

The Consensus CDS protein set database

Better classification and performance

Exploration of hybrid models in proteomics research

[19]

Attention-based Hybrid Model

PDB-2272

State-of-the-art performance

Application of hybrid models in drug target prediction

[20]

Random Forest and Decision Tree

SWISS-PROT Dataset

Captured spatial dependencies

Investigation of attention mechanisms in protein engineering

[21]

CNN and RNN

PROSITE database

Improved classification accuracy

Application of hybrid models in drug target prediction

[22]

NLP with Machine learning

CASP Dataset

Improved classification accuracy

Development of attention mechanisms for protein-protein interaction prediction

Proposed Hybrid

Attention method with Improved CNN and BiLSTM

PDB-14,189 Datasets

Improved classification accuracy

Time Complexity can improve.