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Table 2 The ten ontologies with the most unsatisfiable classes in the OBO ontologies, when combined with a repaired version of the merged OBO Foundry ontology

From: Towards semantic interoperability: finding and repairing hidden contradictions in biomedical ontologies

Ontology name

Unsatisfiable class count

Unified Phenotype Ontology (UPHENO) [44]

106,126

Monarch Disease Ontology (MONDO) [45]

97,619

Ontology for MIRNA Target (OMIT) [46]

63,015

Molecular Process Ontology (MOP) [47]

57,355

Name Reaction Ontology (RXNO) [48]

57,330

Human Phenotype Ontology (HP) [6]

46,075

Mammalian Phenotype Ontology (MP) [7]

43,806

Cell Ontology (CL) [49]

34,685

Ontology of Biological Attributes (OBA) [50]

26,523

Ontology of Adverse Events (OAE) [51]

20,566

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BMC Medical Informatics and Decision Making

ISSN: 1472-6947

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